idiv: taxonomy & climate
Scott Chamberlain (@sckottie/@ropensci)
UC Berkeley / rOpenSci
scotttalks.info/idiv
taxonomy: taxize
taxonomy data sources
- Encylopedia of Life
- Taxonomic Name Resolution Service
- Integrated Taxonomic Information Service
- Global Names Resolver/Global Names Index
- IUCN Red List
- Tropicos
- Theplantlist
- Catalogue of Life
- NCBI
- International Plant Names Index (IPNI)
- Barcode of Life Data Systems (BOLD)
- National Biodiversity Network (UK)
- Index Fungorum
- EU BON
- Index of Names (ION)
- Open Tree of Life (TOL)
- World Register of Marine Species (WoRMS)
- NatureServe
taxizedb
when you want all the data
but you need to know SQL
taxizedb
ITIS
NCBI
COL
TPL
climate data overview
climate packages
rnoaa - lots of NOAA data
camsRad - CAMS radiation data
ccafs - CCAFS General Circ. Models
rWBclimate - World Bank climate
clifro - New Zealand's National Climate Database
riem - ASOS/Iowa Environment Mesonet
cmipr - Coupled Model Intercomparison Project
GSODR - NOAA Global Surface Summary of the Day
getCRUCLdata - Univ. East Anglia Clim. Res. Unit
getlandsat - Univ. East Anglia Clim. Res. Unit
climate packages: others
data in rnoaa
- NOAA NCDC climate data
- Severe weather data
- Sea ice data
- NOAA buoy data
- ERDDAP data
- Tornadoes!
- HOMR - Historical Observing Metadata Repository
- Storm data - IBTrACS
- GHCND FTP data
- Global Ensemble Forecast System (GEFS) data
- Extended Reconstructed Sea Surface Temperature (ERSST) data
- Argo buoys
- NOAA CO-OPS - tides and currents data
- Climate Prediction Center (coming soon)
gis layers
leaflet - interactive maps
rnaturalearth - NaturalEarth layers
geonames - Geonames: geocoding
spatial task view